PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv6_141490_ncmt.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 257aa    MW: 29046.5 Da    PI: 5.2041
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv6_141490_ncmt.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.84.4e-09147194455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR+riN+++  L++l+P +     k +  a +L   ++Y++sLq
  Bv6_141490_ncmt.t1 147 SHSLAERVRRERINEKLKVLQDLVPGC----YKTMGMAVMLDVIINYVRSLQ 194
                         8*************************8....355888888999999988887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.26E-12141198No hitNo description
SuperFamilySSF474598.64E-17141212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.497143193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.5E-16143205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.5E-6147194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-8149199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:2000488Biological Processpositive regulation of brassinosteroid biosynthetic process
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MEEFRNDIQK VLKPTAAFSQ LNSNMELFTS FSELNQPLSS HILDYFSSNN VINNADTNQP  60
PYSNEQLEFT FVEDSAIAHS LLCVSDQTHS TAVQLSSDFG SEAGPNNRID QNNSTTGKKR  120
KRKDEVEVEK PKDVIHVRAK RGQATDSHSL AERVRRERIN EKLKVLQDLV PGCYKTMGMA  180
VMLDVIINYV RSLQNQIEFL SMKLSAASMF YDFNSPEAEA IETLQRTTNP CDAEETERVA  240
KEGYGGMLPK LHSSWPF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117122KKRKRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010681492.10.0PREDICTED: transcription factor bHLH75-like
SwissprotA4D9989e-58BH075_ARATH; Transcription factor bHLH75
TrEMBLA0A0J8C3F80.0A0A0J8C3F8_BETVU; Uncharacterized protein
STRINGVIT_01s0011g03720.t018e-74(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.17e-54bHLH family protein